584896,584914d
567324,567327c
Filename: pool/main/t/twig-i18n-extension/php-twig-i18n-extension_5.0.0-1.1_all.deb
Size: 10896
MD5sum: ed88a748e831e25842205cefe8ace962
SHA256: d93ef8c12e01a087cb929ed90d0f1a84cbd6b7f7effe033ae510930d987188f5
.
567313c
Version: 5.0.0-1.1
.
539547,539566d
530257,530273d
487642a
Package: r-other-wasabi
Version: 1.0.1-3
Installed-Size: 54
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-base-core (>= 4.2.2.20221110-1), r-api-4.0, r-cran-data.table, r-cran-rjson, r-bioc-rhdf5
Description: prepare Sailfish and Salmon output for downstream analysis using GNU R
Homepage: https://github.com/COMBINE-lab/wasabi
Description-md5: fae6e980fc6737f3b616dc4b1a0df7ea
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-other-wasabi/r-other-wasabi_1.0.1-3_all.deb
Size: 27932
MD5sum: a526f1e09fca51e8aa23af3c8f45c4e5
SHA256: cf69683901d87dfb8ec51f5d30b870c17ea6b969f8eedcaf5eb39d0630dfa134

.
487576a
Package: r-other-ascat
Version: 3.1.2-1
Installed-Size: 547
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-base-core (>= 4.3.1-1), r-api-4.0, r-cran-rcolorbrewer, r-cran-data.table, r-bioc-genomicranges, r-bioc-iranges, r-cran-doparallel, r-cran-foreach
Description: Allele-Specific Copy Number Analysis of Tumours
Homepage: https://github.com/Crick-CancerGenomics/ascat
Description-md5: d6e36e46f4a8e8a488fcc87a3cc6f134
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-other-ascat/r-other-ascat_3.1.2-1_all.deb
Size: 331260
MD5sum: 12fd1c8e12c2d419845c8b6af127b049
SHA256: e5c6b1426d241d2441ff12326605f7aeca4e873c6af1646c84a29db2a3f2c438

.
486877a
Package: r-cran-tigger
Version: 1.1.0-1
Installed-Size: 4159
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-cran-ggplot2 (>= 3.4.0), r-cran-alakazam (>= 1.3.0), r-cran-dplyr (>= 1.0.0), r-cran-doparallel, r-cran-foreach, r-cran-gridextra, r-cran-gtools, r-cran-iterators, r-cran-lazyeval, r-cran-rlang, r-cran-stringi, r-cran-tidyr (>= 1.1.0)
Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-testthat
Description: Infers new Immunoglobulin alleles from Rep-Seq Data
Homepage: https://cran.r-project.org/package=tigger
Description-md5: 7bedf1181b6cce84d2b1c1d9dac6be75
Section: science
Priority: optional
Filename: pool/main/r/r-cran-tigger/r-cran-tigger_1.1.0-1_all.deb
Size: 4099664
MD5sum: 8644f62b384e6e4e8f9598cd702c6eb0
SHA256: f385ae3cd223c64c33a423d228a60b3235fbe48ec1801cece65770a54dc95997

.
486352a
Package: r-cran-sparr
Version: 2.3-10-1
Installed-Size: 625
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-base-core (>= 4.3.1-1), r-api-4.0, r-cran-spatstat (>= 2.3-0), r-cran-spatstat.utils, r-cran-spatstat.geom, r-cran-spatstat.explore, r-cran-spatstat.random, r-cran-doparallel, r-cran-foreach, r-cran-misc3d
Description: GNU R spatial and spatiotemporal relative risk
Homepage: https://cran.r-project.org/package=sparr
Description-md5: 4d71906155f0f6dd4b6c2f1abb95e0f2
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-cran-sparr/r-cran-sparr_2.3-10-1_all.deb
Size: 595312
MD5sum: 9061399a699d8560f9d04288ad87b03d
SHA256: 1f5683b9db305bfc1ca268a4a2a16dcce9b4239895be181a5cf9ff03640af4a0

.
486046a
Package: r-cran-shazam
Version: 1.2.0-1
Installed-Size: 2675
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-cran-ggplot2 (>= 3.4.0), r-cran-alakazam (>= 1.3.0), r-cran-ape, r-cran-diptest, r-cran-doparallel, r-cran-dplyr (>= 1.0), r-cran-foreach, r-cran-igraph (>= 1.5.0), r-cran-iterators, r-cran-kernsmooth, r-cran-lazyeval, r-cran-mass, r-cran-progress, r-cran-rlang, r-cran-scales, r-cran-seqinr, r-cran-stringi (>= 1.1.3), r-cran-tidyr, r-cran-tidyselect
Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-testthat
Description: Immunoglobulin Somatic Hypermutation Analysis
Homepage: https://cran.r-project.org/package=shazam
Description-md5: 34fd8fba9274dcd56ee399bba24b4182
Section: science
Priority: optional
Filename: pool/main/r/r-cran-shazam/r-cran-shazam_1.2.0-1_all.deb
Size: 2194220
MD5sum: f2d576119efcccdad4b27bc68186741d
SHA256: 0754aaadd0c84eede5b697869bce8dc16b520e219fcbc3fcc3bc86d40f226823

.
482232a
Package: r-cran-kernelheaping
Version: 2.3.0-1
Installed-Size: 200
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-base-core (>= 4.1.2-2), r-api-4.0, r-cran-mass, r-cran-ks, r-cran-sparr, r-cran-sp, r-cran-plyr, r-cran-dplyr, r-cran-fastmatch, r-cran-fitdistrplus, r-cran-gb2, r-cran-magrittr, r-cran-mvtnorm
Description: GNU R kernel density estimation for heaped and rounded data
Homepage: https://cran.r-project.org/package=Kernelheaping
Description-md5: 09e7fb0372b84eb9d895da69bcffbfbb
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-cran-kernelheaping/r-cran-kernelheaping_2.3.0-1_all.deb
Size: 171308
MD5sum: 8a5e034416dad1409132fcdb7af255cd
SHA256: a67f39a0086cdbbfd99a860f778ad6df034df83e243ea93b8c49432a8e0e6804

.
478180,478183c
Filename: pool/main/r/r-bioc-zlibbioc/r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb
Size: 9968
MD5sum: 26886bba3558261da8f715c0096deae9
SHA256: 5087a1ae9257b5c8c12901f7f355a67bb1ce1f4f1b7f30b4bc923097d070b235
.
478172,478174c
Depends: r-api-4.0, r-api-bioc-3.20, zlib1g-dev
Suggests: r-bioc-biocstyle, r-cran-knitr
.
478168c
Version: 1.52.0+dfsg-2
.
478162,478165c
Filename: pool/main/r/r-bioc-wrench/r-bioc-wrench_1.24.0+dfsg-2_all.deb
Size: 59252
MD5sum: c7606f94bbfbdd84604958e462a3e22b
SHA256: 78a4c717989dbdcd8fe1f89fb0c6a8bb7a10145779ce0c17383c7de4e9d30933
.
478155,478156c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-limma, r-cran-matrixstats, r-cran-locfit
Suggests: r-cran-knitr, r-cran-rmarkdown, r-bioc-metagenomeseq, r-bioc-deseq2, r-bioc-edger
.
478151c
Version: 1.24.0+dfsg-2
.
478145,478148c
Filename: pool/main/r/r-bioc-ucsc.utils/r-bioc-ucsc.utils_1.2.0+ds-2_all.deb
Size: 77316
MD5sum: a66fbf3a519b3da3edfef49fffcf8c77
SHA256: 616e814c7d85fc348a5049974fb74fe4fd08492731d337ecba803a24192e2e01
.
478142c
Description-md5: 6431a5126815e1fab54b1ff41a290355
.
478138,478140c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-httr, r-cran-jsonlite, r-bioc-s4vectors
Suggests: r-cran-dbi, r-cran-rmariadb, r-bioc-genomeinfodb, r-cran-testthat, r-cran-knitr, r-cran-rmarkdown, r-bioc-biocstyle
Description: Low-level utilities to retrieve data from the UCSC Genome Browser
.
478134c
Version: 1.2.0+ds-2
.
478128,478131c
Filename: pool/main/r/r-bioc-tximportdata/r-bioc-tximportdata_1.34.0+ds-2_all.deb
Size: 9332
MD5sum: f17478ec683106981e4ac4497661aa74
SHA256: 624494a488fa500fbdd82f04dee9c57c3e0e0cdd34449b87b3d35356a2ea86e1
.
478121c
Depends: r-api-4.0, r-api-bioc-3.20
.
478117c
Version: 1.34.0+ds-2
.
478111,478114c
Filename: pool/main/r/r-bioc-tximport/r-bioc-tximport_1.34.0+dfsg-2_all.deb
Size: 91204
MD5sum: f77fe608b2b43a24b3086c6535714b44
SHA256: 51f131ffb71c65eb80681d5c92da0fb3f7e79fbe9f29d0b5bc9e9a44a5bb0118
.
478104c
Depends: r-api-4.0, r-api-bioc-3.20
.
478100c
Version: 1.34.0+dfsg-2
.
478094,478097c
Filename: pool/main/r/r-bioc-tcgabiolinksgui.data/r-bioc-tcgabiolinksgui.data_1.26.0+dfsg-2_all.deb
Size: 22494244
MD5sum: dd61ad901cbb0e54bebd3314cdefc276
SHA256: 4be963b4eee9f5f24c339d68380edb04a27c422c4d17d755385429d1e304a200
.
478087c
Depends: r-api-4.0, r-api-bioc-3.20
.
478083c
Version: 1.26.0+dfsg-2
.
478077,478080c
Filename: pool/main/r/r-bioc-stringdb/r-bioc-stringdb_2.18.0-2_all.deb
Size: 10622700
MD5sum: 1dcca6524ac0766f699c55e3c99f7bdf
SHA256: 2813a91e7f17a1d0ccfdf426dd0c56634adadccde3267e003b27bbc2f19d287f

Package: r-bioc-structuralvariantannotation
Version: 1.22.0+ds-2
Installed-Size: 1297
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-genomicranges, r-bioc-rtracklayer, r-bioc-variantannotation, r-bioc-biocgenerics, r-cran-assertthat, r-bioc-biostrings, r-bioc-pwalign, r-cran-stringr, r-cran-dplyr, r-cran-rlang, r-bioc-genomicfeatures, r-bioc-iranges, r-bioc-s4vectors, r-bioc-summarizedexperiment, r-bioc-genomeinfodb
Suggests: r-cran-ggplot2, r-cran-devtools, r-cran-testthat (>= 2.1.0), r-cran-roxygen2, r-cran-rmarkdown, r-cran-tidyverse, r-cran-knitr, r-bioc-ggbio, r-bioc-biovizbase
Description: Variant annotations for structural variants
Homepage: https://bioconductor.org/packages/StructuralVariantAnnotation/
Description-md5: da0d30e1c2fddfc05ec9f7a5a97d4001
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-structuralvariantannotation/r-bioc-structuralvariantannotation_1.22.0+ds-2_all.deb
Size: 401032
MD5sum: 02f3afd5f64221b4d8fa82a4e5edf468
SHA256: 39cb0fad90aeb0f32a9d187750aa5f4fa3d74c95c1c2cb7bbcea5aa9f0873d30

Package: r-bioc-summarizedexperiment
Version: 1.36.0+dfsg-2
Installed-Size: 2149
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-matrixgenerics (>= 1.1.3), r-bioc-genomicranges (>= 1.55.2), r-bioc-biobase, r-cran-matrix, r-bioc-biocgenerics (>= 0.51.3), r-bioc-s4vectors (>= 0.33.7), r-bioc-iranges (>= 2.23.9), r-bioc-genomeinfodb (>= 1.13.1), r-bioc-s4arrays (>= 1.1.1), r-bioc-delayedarray (>= 0.31.12)
Suggests: r-cran-jsonlite, r-bioc-rhdf5, r-bioc-hdf5array (>= 1.7.5), r-bioc-annotate, r-bioc-annotationdbi, r-bioc-genomicfeatures, r-bioc-sparsearray, r-bioc-singlecellexperiment, r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown, r-cran-runit, r-cran-testthat, r-cran-digest
Description: BioConductor assay container
Homepage: https://bioconductor.org/packages/SummarizedExperiment/
Description-md5: 5c2a3a19acbf2acab35e79bd1c3147fd
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-summarizedexperiment/r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb
Size: 1115712
MD5sum: 76c96b9ce609ed7b88754e7bb481c563
SHA256: 4d323e893c99255cc6a6c8559fe3f111fcd8654ea5bf365b4dbcca0569cb8ddd

Package: r-bioc-tcgabiolinks
Version: 2.34.0+dfsg-2
Installed-Size: 6550
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-downloader (>= 0.4), r-bioc-biomart, r-cran-dplyr, r-cran-tibble, r-bioc-genomicranges, r-cran-xml (>= 3.98.0), r-cran-data.table, r-cran-jsonlite (>= 1.0.0), r-cran-plyr, r-cran-knitr, r-cran-ggplot2, r-cran-stringr (>= 1.0.0), r-bioc-iranges, r-cran-rvest (>= 0.3.0), r-bioc-s4vectors, r-cran-r.utils, r-bioc-summarizedexperiment (>= 1.4.0), r-bioc-tcgabiolinksgui.data (>= 1.15.1), r-cran-readr, r-cran-tidyr, r-cran-purrr, r-cran-xml2, r-cran-httr (>= 1.2.1)
Suggests: r-cran-jpeg, r-cran-png, r-bioc-biocstyle, r-cran-rmarkdown, r-cran-devtools, r-cran-parmigene, r-bioc-biobase, r-bioc-affy, r-cran-testthat, r-bioc-annotationhub, r-bioc-experimenthub, r-cran-seurat, r-bioc-complexheatmap, r-cran-circlize, r-bioc-consensusclusterplus, r-cran-igraph, r-bioc-limma, r-bioc-edger, r-bioc-sva, r-bioc-edaseq, r-cran-survminer, r-bioc-genefilter, r-cran-gridextra, r-cran-survival, r-cran-doparallel, r-cran-ggrepel (>= 0.6.3), r-cran-scales, r-cran-dt
Description: GNU R/Bioconductor package for integrative analysis with GDC data
Homepage: https://bioconductor.org/packages/TCGAbiolinks/
Description-md5: a12bea649d7df136b7f6898c8a08d8c7
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-tcgabiolinks/r-bioc-tcgabiolinks_2.34.0+dfsg-2_all.deb
Size: 6300004
MD5sum: 20655db97927fcd2e5bfadfad9376388
SHA256: 815eecdc922ceedfa91359f33e38ec73e758b8ae377b869abe77b207a884b363
.
478070c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-png, r-cran-sqldf, r-cran-plyr, r-cran-igraph, r-cran-httr, r-cran-rcolorbrewer, r-cran-gplots, r-cran-hash, r-cran-plotrix
.
478066,478067c
Version: 2.18.0-2
Installed-Size: 10480
.
478060,478063c
Filename: pool/main/r/r-bioc-seqlogo/r-bioc-seqlogo_1.72.0+dfsg-2_all.deb
Size: 165256
MD5sum: 0dd370ea32a76d6d538c6cca04a24b8c
SHA256: 472a1c5e8251aa17852c95a0ca3ddf038363509c7d59fe22826c4a3e79ef998e

Package: r-bioc-singlecellexperiment
Version: 1.28.1+ds-2
Installed-Size: 1437
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-summarizedexperiment, r-bioc-s4vectors, r-bioc-biocgenerics, r-bioc-genomicranges, r-bioc-delayedarray
Suggests: r-cran-testthat, r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown, r-cran-matrix, r-bioc-scrnaseq (>= 2.9.1), r-cran-rtsne
Description: S4 Classes for Single Cell Data
Homepage: https://bioconductor.org/packages/SingleCellExperiment/
Description-md5: 9bf9172ac3b14c7eddedce6119293cc1
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-singlecellexperiment/r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb
Size: 834644
MD5sum: 57503cf52636127f960a6f394ee00f17
SHA256: e08019b0c4d5c2a8d99aa2c179a6e7b4e979d240f04f65b4113ffa50385d649c

Package: r-bioc-spatialexperiment
Version: 1.16.0+ds-2
Installed-Size: 1790
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-singlecellexperiment, r-cran-rjson, r-cran-magick, r-bioc-s4vectors, r-bioc-summarizedexperiment, r-bioc-biocgenerics, r-bioc-biocfilecache
Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-testthat, r-bioc-biocstyle, r-bioc-dropletutils
Description: S4 Class for Spatially Resolved -omics Data
Homepage: https://bioconductor.org/packages/SpatialExperiment
Description-md5: 1268fbb29c7607d5d8e5670725200908
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-spatialexperiment/r-bioc-spatialexperiment_1.16.0+ds-2_all.deb
Size: 959736
MD5sum: b405c8cf5f211106950612b9ded0119b
SHA256: f2b32aac725fe2ac03a77ea3515de5cf9855cddee9723b38eb7d7aa879914cbc
.
478053c
Depends: r-api-4.0, r-api-bioc-3.20
.
478049c
Version: 1.72.0+dfsg-2
.
478043,478046c
Filename: pool/main/r/r-bioc-scaledmatrix/r-bioc-scaledmatrix_1.14.0+dfsg-2_all.deb
Size: 326316
MD5sum: 7e9fadd5795b78a20e62432986966d72
SHA256: 6e624dcb71480a77731bb28ef1361b23a29d54fd342ed15cb47992395b6449f2
.
478036,478037c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-matrix, r-bioc-s4vectors, r-bioc-delayedarray
Suggests: r-cran-testthat, r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown, r-bioc-biocsingular, r-bioc-delayedmatrixstats
.
478032,478033c
Version: 1.14.0+dfsg-2
Installed-Size: 500
.
478026,478029c
Filename: pool/main/r/r-bioc-savr/r-bioc-savr_1.37.0-6_all.deb
Size: 632056
MD5sum: 1448012ad3b02c576a3926609e8c7cd2
SHA256: 0585323e36a2ab31dc1ec39e3df51e64b6c9b7a3d1df928d2e3f8a9aabcb8775
.
478019c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-ggplot2, r-cran-reshape2, r-cran-scales, r-cran-gridextra, r-cran-xml
.
478015,478016c
Version: 1.37.0-6
Installed-Size: 1406
.
478009,478012c
Filename: pool/main/r/r-bioc-rwikipathways/r-bioc-rwikipathways_1.26.0+dfsg-2_all.deb
Size: 139528
MD5sum: 118a2191a527d04d286ffc99bafb6d05
SHA256: 26b9f2555975a9fc3eee8d74f35633291e75bc06e648d85f9f5029e28e1ad69d

Package: r-bioc-saturn
Version: 1.14.0+dfsg-2
Installed-Size: 3033
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-locfdr, r-bioc-summarizedexperiment, r-bioc-biocparallel, r-bioc-limma, r-cran-pbapply, r-cran-ggplot2, r-cran-boot, r-cran-matrix
Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-testthat, r-cran-covr, r-bioc-biocstyle, r-bioc-annotationhub, r-bioc-ensembldb, r-bioc-edger, r-bioc-dexseq, r-bioc-delayedarray
Description: scalable analysis of differential transcript usage for RNA-sequencing
Homepage: https://bioconductor.org/packages/satuRn/
Description-md5: 2f8da19201f957f38ef49c73ed264d95
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-saturn/r-bioc-saturn_1.14.0+dfsg-2_all.deb
Size: 3019004
MD5sum: 96268236714c7482b0cedda4860151af
SHA256: 71a9472aad61bda7dac420c7553cc435cf08392bb1b9fb8d6653ea177988a43f
.
478002c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-httr, r-cran-xml, r-cran-rjson, r-cran-data.table, r-cran-rcurl, r-cran-dplyr, r-cran-tidyr, r-cran-readr, r-cran-stringr, r-cran-purrr, r-cran-lubridate
.
477998c
Version: 1.26.0+dfsg-2
.
477992,477995c
Filename: pool/main/r/r-bioc-residualmatrix/r-bioc-residualmatrix_1.16.0+dfsg-2_all.deb
Size: 319184
MD5sum: c65a22bd2ee3792306cc47bb8ae80840
SHA256: 19230cfae75b537670f5c0ed5443a61c0c9e905ab8f5f0441e429436d6ebf5d7
.
477985,477986c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-matrix, r-bioc-s4vectors, r-bioc-delayedarray
Suggests: r-cran-testthat, r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown, r-bioc-biocsingular
.
477981,477982c
Version: 1.16.0+dfsg-2
Installed-Size: 492
.
477975,477978c
Filename: pool/main/r/r-bioc-rcwl/r-bioc-rcwl_1.22.0+ds-2_all.deb
Size: 327500
MD5sum: f11bd14bd3ca1fa193fd488d67fafb9f
SHA256: 08354b882fa1f6d8455b8affb7d3914cdfb8b038bb1d25227868fa8358a505dd
.
477968,477969c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-yaml, r-bioc-s4vectors (>= 0.42.1), r-bioc-biocparallel (>= 1.38.0), r-cran-batchtools, r-cran-diagrammer, r-cran-shiny, r-cran-r.utils, r-cran-codetools, cwltool, r-bioc-basilisk (>= 1.16.0)
Suggests: r-cran-testthat, r-cran-knitr, r-cran-rmarkdown, r-bioc-biocstyle
.
477964,477965c
Version: 1.22.0+ds-2
Installed-Size: 421
.
477958,477961c
Filename: pool/main/r/r-bioc-rcpi/r-bioc-rcpi_1.42.0+ds-2_all.deb
Size: 1140768
MD5sum: bad085b098fe984b7af588c6d4a56c7f
SHA256: b217db0c61a87cebe8688b598b3a6228005f2b3c5e42ac4f8894ee6b72332fc3
.
477951c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biostrings, r-bioc-gosemsim, r-cran-curl, r-cran-doparallel, r-cran-foreach, r-cran-httr2, r-cran-jsonlite, r-cran-rlang, pkgconf, r-bioc-pwalign
.
477947c
Version: 1.42.0+ds-2
.
477941,477944c
Filename: pool/main/r/r-bioc-qvalue/r-bioc-qvalue_2.38.0-2_all.deb
Size: 2813652
MD5sum: 03d078633d52f5768c6e55fe71cf285e
SHA256: 6b54fcbd2ff11d926377642160b42d0ed671913cbcbfa7e9db1c600911c970f9
.
477930c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-ggplot2, r-cran-reshape2
.
477926,477927c
Version: 2.38.0-2
Installed-Size: 2844
.
477920,477923c
Filename: pool/main/r/r-bioc-qusage/r-bioc-qusage_2.40.0-2_all.deb
Size: 10223036
MD5sum: c55e1415a96ea763fc460a1ada5a697b
SHA256: f0e7329c847b132461ac8d2f1c7deed161eb4bd2abd12b824084bff56e16e67d
.
477914c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-limma (>= 3.14), r-bioc-biobase, r-cran-nlme, r-cran-emmeans, r-cran-fftw
.
477910,477911c
Version: 2.40.0-2
Installed-Size: 10272
.
477904,477907c
Filename: pool/main/r/r-bioc-pwmenrich/r-bioc-pwmenrich_4.42.0-2_all.deb
Size: 2045888
MD5sum: 96247179cc23bb8df50763d12076b40e
SHA256: 519733e7a9c95e885cd767069058baeba7535d76b0835b8efa3b3a58d24e2b3a

Package: r-bioc-qtlizer
Version: 1.20.0+dfsg-2
Installed-Size: 79
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-httr, r-cran-curl, r-bioc-genomicranges, r-cran-stringi
Suggests: r-bioc-biocstyle, r-cran-testthat, r-cran-knitr, r-cran-rmarkdown
Description: Comprehensive QTL annotation of GWAS results
Homepage: https://bioconductor.org/packages/Qtlizer/
Description-md5: 5b35e989d6119eccd08fc5475733d919
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-qtlizer/r-bioc-qtlizer_1.20.0+dfsg-2_all.deb
Size: 27384
MD5sum: dc7d221271345fb844bf1be549f07b14
SHA256: 65842b58dbc08f83bc9e1e5a45ba1cd44fc8401a321deeb8753a55505f316488
.
477897c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics, r-bioc-biostrings, r-bioc-seqlogo, r-cran-gdata, r-cran-evd, r-bioc-s4vectors
.
477893,477894c
Version: 4.42.0-2
Installed-Size: 2334
.
477887,477890c
Filename: pool/main/r/r-bioc-protgenerics/r-bioc-protgenerics_1.38.0-2_all.deb
Size: 238604
MD5sum: e29c7684d7dd270df4b5ee828492d0c0
SHA256: bc727d7e67539c546f6563025c198ded1758313a4935a0913e2617d2070bdb58

Package: r-bioc-purecn
Version: 2.12.0+dfsg-2
Installed-Size: 6928
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-dnacopy, r-bioc-variantannotation (>= 1.14.1), r-bioc-genomicranges (>= 1.20.3), r-bioc-iranges (>= 2.2.1), r-cran-rcolorbrewer, r-bioc-s4vectors, r-cran-data.table, r-bioc-summarizedexperiment, r-bioc-genomeinfodb, r-bioc-genomicfeatures, r-bioc-rsamtools, r-bioc-biobase, r-bioc-biostrings, r-bioc-biocgenerics, r-bioc-rtracklayer, r-cran-ggplot2, r-cran-gridextra, r-cran-futile.logger, r-cran-vgam, r-cran-mclust, r-bioc-rhdf5, r-cran-matrix
Suggests: r-bioc-biocparallel, r-bioc-biocstyle, r-cran-pscbs, r-cran-r.utils, r-cran-covr, r-cran-knitr, r-cran-optparse, r-bioc-org.hs.eg.db, r-cran-jsonlite, r-cran-markdown, r-cran-rmarkdown, r-cran-testthat
Description: copy number calling and SNV classification using targeted short read sequencing
Homepage: https://bioconductor.org/packages/PureCN/
Description-md5: 8e04360f54e8e8be0dd9281fc8ab5c7b
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-purecn/r-bioc-purecn_2.12.0+dfsg-2_all.deb
Size: 6025000
MD5sum: 5d3ae04cf2842071a5b2fb8662a48902
SHA256: bf2761291ef8521f580087e30a25732bb5298973adddc5e2197f16c4600845f5
.
477880c
Depends: r-api-4.0, r-api-bioc-3.20
.
477876,477877c
Version: 1.38.0-2
Installed-Size: 385
.
477870,477873c
Filename: pool/main/r/r-bioc-progeny/r-bioc-progeny_1.28.0+ds-2_all.deb
Size: 8899992
MD5sum: a4e501a202513227ea92e5406665402f
SHA256: 003f2f88e6ff4c277eb3d6196285ef805f14c5279c82ff1bd1494939c9151557
.
477863,477864c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase, r-cran-dplyr, r-cran-tidyr, r-cran-ggplot2, r-cran-ggrepel, r-cran-gridextra, r-bioc-decoupler, r-cran-reshape2
Suggests: r-bioc-biomart, r-bioc-biocfilecache, r-cran-broom, r-cran-seurat, r-bioc-singlecellexperiment, r-bioc-deseq2, r-bioc-biocstyle, r-cran-knitr, r-cran-readr, r-cran-readxl, r-cran-pheatmap, r-cran-tibble, r-cran-rmarkdown, r-cran-testthat (>= 2.1.0)
.
477859,477860c
Version: 1.28.0+ds-2
Installed-Size: 8782
.
477853,477856c
Filename: pool/main/r/r-bioc-pfamanalyzer/r-bioc-pfamanalyzer_1.6.0+dfsg-2_all.deb
Size: 32692
MD5sum: 61dbf073f48e54f53e0b2d2fdab834e4
SHA256: 786288e9702b6481a9a41a12206ad05ba89da5572a664441820abb38f042fdd1

Package: r-bioc-phyloseq
Version: 1.50.0+dfsg-2
Installed-Size: 3134
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-ade4 (>= 1.7-4), r-cran-ape (>= 5.0), r-bioc-biobase (>= 2.36.2), r-bioc-biocgenerics (>= 0.22.0), r-bioc-biomformat (>= 1.0.0), r-bioc-biostrings (>= 2.40.0), r-cran-cluster (>= 2.0.4), r-cran-data.table (>= 1.10.4), r-cran-foreach (>= 1.4.3), r-cran-ggplot2 (>= 2.1.0), r-cran-igraph (>= 1.0.1), r-bioc-multtest (>= 2.28.0), r-cran-plyr (>= 1.8.3), r-cran-reshape2 (>= 1.4.1), r-cran-scales (>= 0.4.0), r-cran-vegan (>= 2.5)
Suggests: r-bioc-biocstyle (>= 2.4), r-bioc-deseq2 (>= 1.16.1), r-bioc-genefilter (>= 1.58), r-cran-knitr (>= 1.16), r-cran-magrittr (>= 1.5), r-bioc-metagenomeseq (>= 1.14), r-cran-rmarkdown (>= 1.6), r-cran-testthat (>= 1.0.2)
Description: GNU R handling and analysis of high-throughput microbiome census data
Homepage: https://bioconductor.org/packages/phyloseq/
Description-md5: ce1efdc42d4cdfd64fc0152b75e33d3f
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-phyloseq/r-bioc-phyloseq_1.50.0+dfsg-2_all.deb
Size: 2255164
MD5sum: c8cb3240eb4b3a83221df416408191e2
SHA256: 2806dacca7b4be8488bb2ae0a0f24d85e39e39e24cc634437fb56ba4f95d27a6
.
477846c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-readr, r-cran-stringr, r-cran-dplyr, r-cran-tibble, r-cran-magrittr
.
477842c
Version: 1.6.0+dfsg-2
.
477836,477839c
Filename: pool/main/r/r-bioc-org.hs.eg.db/r-bioc-org.hs.eg.db_3.20.0-3_all.deb
Size: 40648940
MD5sum: 5a19e21282e1c2ae1e4999f3f016113a
SHA256: bd70ee514adaa6af1bb1a194c35363b91ff873e4a5f649d5c5efcd7bb97d6fa9
.
477832c
Homepage: https://bioconductor.org/packages/org.Hs.eg.db/
.
477829,477830c
Depends: r-api-4.0, r-bioc-annotationdbi (>= 1.67.0)
Suggests: r-cran-dbi, r-bioc-annotate, r-cran-runit
.
477825,477826c
Version: 3.20.0-3
Installed-Size: 374405
.
477819,477822c
Filename: pool/main/r/r-bioc-noiseq/r-bioc-noiseq_2.50.0-2_all.deb
Size: 2517124
MD5sum: d7d3a31a78c5899f9ec5fa63a2dd6e4e
SHA256: ff857124419c71a9562e8dac46e3334bca563ae7d2232926044da02464e922eb

Package: r-bioc-oligoclasses
Version: 1.68.0-2
Installed-Size: 1815
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.27.1), r-bioc-biobase (>= 2.17.8), r-bioc-iranges (>= 2.5.17), r-bioc-genomicranges (>= 1.23.7), r-bioc-summarizedexperiment, r-bioc-biostrings (>= 2.23.6), r-bioc-affyio (>= 1.23.2), r-cran-foreach, r-cran-biocmanager, r-bioc-s4vectors (>= 0.9.25), r-cran-rsqlite, r-cran-dbi, r-cran-ff
Suggests: r-cran-runit
Description: Classes for high-throughput arrays supported by oligo and crlmm
Homepage: https://bioconductor.org/packages/oligoClasses/
Description-md5: 10faf450f8dfd68d79e1c3ceb537af2e
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-oligoclasses/r-bioc-oligoclasses_1.68.0-2_all.deb
Size: 1271516
MD5sum: 5473ad5c50799193ec61ccc0971f43a8
SHA256: f023ea437c851cc5c2b8198aba482b5dc3d7811fd1b63bddb40e351671849870
.
477813c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase (>= 2.13.11), r-cran-matrix (>= 1.2)
.
477809,477810c
Version: 2.50.0-2
Installed-Size: 2726
.
477803,477806c
Filename: pool/main/r/r-bioc-netsam/r-bioc-netsam_1.46.0-3_all.deb
Size: 1129820
MD5sum: f2b8f24107092957ac08f70197324cfb
SHA256: 24c9d2351eed36881d8248aa7f6023eda47585e74869b127f276c3c6b8aadcd5
.
477796c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-seriation (>= 1.0-6), r-cran-igraph (>= 2.0.0), r-cran-wgcna (>= 1.34.0), r-bioc-biomart (>= 2.18.0), r-bioc-annotationdbi (>= 1.28.0), r-cran-doparallel (>= 1.0.10), r-cran-foreach (>= 1.4.0), r-cran-survival (>= 2.37-7), r-bioc-go.db (>= 2.10.0), r-cran-r2html (>= 2.2.0), r-cran-dbi (>= 0.5-1)
.
477792c
Version: 1.46.0-3
.
477786,477789c
Filename: pool/main/r/r-bioc-metagenomeseq/r-bioc-metagenomeseq_1.48.1-1_all.deb
Size: 2139908
MD5sum: 82844651f1059efaca962f46f1e8a872
SHA256: c8f75a7f6d3106e12808a64312df76592bd09decee42e1bc3aad80fbca4a7737

Package: r-bioc-multiassayexperiment
Version: 1.32.0+dfsg-2
Installed-Size: 1712
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-summarizedexperiment (>= 1.3.81), r-bioc-biobase, r-bioc-biocbaseutils, r-bioc-biocgenerics, r-bioc-delayedarray, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-cran-tidyr
Suggests: r-bioc-biocstyle, r-bioc-hdf5array, r-cran-knitr, r-cran-r.rsp, r-cran-reshape2, r-cran-rmarkdown, r-cran-survival, r-cran-survminer, r-cran-testthat, r-cran-upsetr
Description: Software for integrating multi-omics experiments in BioConductor
Homepage: https://bioconductor.org/packages/MultiAssayExperiment/
Description-md5: 28c3ac7f2a5a7a8cb156de9549e0b027
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-multiassayexperiment/r-bioc-multiassayexperiment_1.32.0+dfsg-2_all.deb
Size: 1091052
MD5sum: e53ef99acf84e787c29044c53efc9205
SHA256: 6b81c3ed70e667efc1af068d36544447ef8d960087ff925f889bd6d2360b42d2

Package: r-bioc-mutationalpatterns
Version: 3.16.0+dfsg-2
Installed-Size: 4610
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-genomicranges (>= 1.24.0), r-cran-nmf (>= 0.20.6), r-bioc-s4vectors, r-bioc-biocgenerics (>= 0.18.0), r-bioc-bsgenome (>= 1.40.0), r-bioc-variantannotation (>= 1.18.1), r-cran-dplyr (>= 0.8.3), r-cran-tibble (>= 2.1.3), r-cran-purrr (>= 0.3.2), r-cran-tidyr (>= 1.0.0), r-cran-stringr (>= 1.4.0), r-cran-magrittr (>= 1.5), r-cran-ggplot2 (>= 2.1.0), r-cran-pracma (>= 1.8.8), r-bioc-iranges (>= 2.6.0), r-bioc-genomeinfodb (>= 1.12.0), r-bioc-biostrings (>= 2.40.0), r-cran-ggdendro (>= 0.1-20), r-cran-cowplot (>= 0.9.2), r-cran-ggalluvial (>= 0.12.2), r-cran-rcolorbrewer
Suggests: r-bioc-biocstyle (>= 2.0.3), r-bioc-biomart (>= 2.28.0), r-cran-gridextra (>= 2.2.1), r-bioc-rtracklayer (>= 1.32.2), r-bioc-genomicfeatures, r-bioc-annotationdbi, r-cran-testthat, r-cran-knitr, r-cran-rmarkdown
Description: GNU R comprehensive genome-wide analysis of mutational processes
Homepage: https://bioconductor.org/packages/MutationalPatterns/
Description-md5: df77cf7ee6fedf752a634a6c8a0008c4
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-mutationalpatterns/r-bioc-mutationalpatterns_3.16.0+dfsg-2_all.deb
Size: 2489596
MD5sum: ae4d0b8ecf50c1b05d58b6cb26fde6a2
SHA256: c579ed1c2fd56e282ed60c34645069315f56d0528c7969c037f93835319a7385
.
477779,477780c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase, r-bioc-limma, r-cran-glmnet, r-cran-rcolorbrewer, r-cran-matrixstats, r-cran-foreach, r-cran-matrix, r-cran-gplots, r-bioc-wrench
Suggests: r-bioc-annotate, r-bioc-biocgenerics, r-bioc-biomformat, r-cran-knitr, r-cran-gss, r-cran-testthat (>= 0.8), r-cran-vegan, r-bioc-ihw
.
477775,477776c
Version: 1.48.1-1
Installed-Size: 2646
.
477769,477772c
Filename: pool/main/r/r-bioc-mergeomics/r-bioc-mergeomics_1.34.0-2_all.deb
Size: 2790228
MD5sum: 5b7a3957549d79afc1042ece54a9a65e
SHA256: cfbce940c311119ab2c3cedbfc061694bef437bc4935dba8cc41a16411cafb72
.
477762c
Depends: r-api-4.0, r-api-bioc-3.20
.
477758,477759c
Version: 1.34.0-2
Installed-Size: 8861
.
477752,477755c
Filename: pool/main/r/r-bioc-megadepth/r-bioc-megadepth_1.16.0+ds-2_all.deb
Size: 86344
MD5sum: 5cb32be68ceeaabe0b7af8512e3cc861
SHA256: 90f549e19e839140747d3aa79334a9bf9cf2215d55a709c4e9b65e0eb86e0add
.
477745c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-xfun, r-cran-fs, r-bioc-genomicranges, r-cran-readr, r-cran-cmdfun, r-cran-dplyr, r-cran-magrittr, megadepth
.
477741c
Version: 1.16.0+ds-2
.
477735,477738c
Filename: pool/main/r/r-bioc-matrixgenerics/r-bioc-matrixgenerics_1.18.1-1_all.deb
Size: 449036
MD5sum: 37b0ada13538112198c5b24006327c4d
SHA256: ef2c2b8c8f4e5e922161fcb4226c6f05f7b8f3a2ad7d232a970abad0ff1cebba
.
477729d
477727c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-matrixstats (>= 1.4.1)
.
477723,477724c
Version: 1.18.1-1
Installed-Size: 671
.
477717,477720c
Filename: pool/main/r/r-bioc-keggrest/r-bioc-keggrest_1.46.0+dfsg-2_all.deb
Size: 183672
MD5sum: 01aa591be6737e5584fc16b4eade3137
SHA256: 3bb8eb4ce7fcb11dd2ee39976cb8a53ee4b46d0fb728c5719de7adeb90771fe1
.
477710,477711c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-httr, r-cran-png, r-bioc-biostrings
Suggests: r-cran-runit, r-bioc-biocgenerics, r-bioc-biocstyle, r-cran-knitr, r-cran-markdown
.
477706,477707c
Version: 1.46.0+dfsg-2
Installed-Size: 246
.
477700,477703c
Filename: pool/main/r/r-bioc-interactivedisplaybase/r-bioc-interactivedisplaybase_1.44.0+dfsg-2_all.deb
Size: 30728
MD5sum: ecc84b8c14cf9b4f69f160721b5418f1
SHA256: 8bf081891b07e500197f90f65bb4c50fd9fa75711a7910e891d6f659f824175e
.
477693c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics, r-cran-shiny, r-cran-dt
.
477689c
Version: 1.44.0+dfsg-2
.
477683,477686c
Filename: pool/main/r/r-bioc-hypergraph/r-bioc-hypergraph_1.78.0-2_all.deb
Size: 174236
MD5sum: 5d6b5d384b695e3e69778c02219e6876
SHA256: 0e68a41182fe37829a99eb370cbe40ac59a50ec21b3d768e52b4e0128fd6d0b9
.
477676,477677c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-graph
Suggests: r-bioc-biocgenerics, r-cran-runit
.
477672c
Version: 1.78.0-2
.
477666,477669c
Filename: pool/main/r/r-bioc-hsmmsinglecell/r-bioc-hsmmsinglecell_1.26.0-2_all.deb
Size: 16774132
MD5sum: 760a20ab24db9de5d2ad2af758884e85
SHA256: 916c6abb713fd168e6ec2e840aaa21561764663bd33f03916ecbb5eb6c431110
.
477660c
Depends: r-api-4.0, r-api-bioc-3.20
.
477656c
Version: 1.26.0-2
.
477633,477636c
Filename: pool/main/r/r-bioc-gypsum/r-bioc-gypsum_1.2.0+ds-2_all.deb
Size: 213248
MD5sum: 061a0b3ee092651ff0d92e46aeca3c24
SHA256: 5985d15f1ab6e8cbdd8bff5f2bd6a2887da56102d9af415956367e2b11b5a155
.
477626,477627c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-httr2, r-cran-jsonlite, r-cran-filelock, r-cran-rappdirs
Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-testthat, r-bioc-biocstyle, r-cran-digest, r-cran-dbi, r-cran-rsqlite, r-bioc-s4vectors
.
477622,477623c
Version: 1.2.0+ds-2
Installed-Size: 260
.
477616,477619c
Filename: pool/main/r/r-bioc-gviz/r-bioc-gviz_1.50.0+dfsg-2_all.deb
Size: 5168228
MD5sum: 029eeceaaa1854df07b39611950b3a3c
SHA256: 875b10f5eeff1d46afe433790df9a7b5fba6b991c9dcb99752b7e15a0e0a9923
.
477613c
Description-md5: 215bf097118555bddbe60d8c28abecee
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-gsvadata/r-bioc-gsvadata_1.42.0-2_all.deb
Size: 17936320
MD5sum: c7c7b45a03b9a2d7f6610cad47716ad3
SHA256: 8deaa45a44c327b1fbcace9b2f84040ba927f1fdff0fca67209b8c2a5aaedf8c

Package: r-bioc-gviz
Version: 1.50.0+dfsg-2
Installed-Size: 7003
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-s4vectors (>= 0.9.25), r-bioc-iranges (>= 1.99.18), r-bioc-genomicranges (>= 1.17.20), r-bioc-xvector (>= 0.5.7), r-bioc-rtracklayer (>= 1.25.13), r-cran-lattice, r-cran-rcolorbrewer, r-bioc-biomart (>= 2.11.0), r-bioc-annotationdbi (>= 1.27.5), r-bioc-biobase (>= 2.15.3), r-bioc-genomicfeatures (>= 1.17.22), r-bioc-ensembldb (>= 2.11.3), r-bioc-bsgenome (>= 1.33.1), r-bioc-biostrings (>= 2.33.11), r-bioc-biovizbase (>= 1.13.8), r-bioc-rsamtools (>= 1.17.28), r-cran-latticeextra (>= 0.6-26), r-cran-matrixstats (>= 0.8.14), r-bioc-genomicalignments (>= 1.1.16), r-bioc-genomeinfodb (>= 1.1.3), r-bioc-biocgenerics (>= 0.11.3), r-cran-digest (>= 0.6.8)
Suggests: r-cran-xml2, r-bioc-biocstyle, r-cran-knitr, r-cran-rmarkdown, r-cran-testthat
Description: Plotting data and annotation information along genomic coordinates
Homepage: https://bioconductor.org/packages/Gviz/
Description-md5: a1192a0bcb8465ef96fce24dbb9e40c0
.
477610c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase, r-bioc-gseabase, r-bioc-hgu95a.db, r-bioc-summarizedexperiment
.
477606,477607c
Version: 1.42.0-2
Installed-Size: 17685
.
477600,477603c
Filename: pool/main/r/r-bioc-gseabase/r-bioc-gseabase_1.68.0+ds-2_all.deb
Size: 716488
MD5sum: e79519d4990d66dd1130c93d89b825b6
SHA256: b24b6b2d3c30a951c2244447b704b928badd1f6b24140eb84359b793b20f3c6b
.
477593,477594c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.13.8), r-bioc-biobase (>= 2.17.8), r-bioc-annotate (>= 1.45.3), r-bioc-graph (>= 1.37.2), r-bioc-annotationdbi, r-cran-xml
Suggests: r-bioc-go.db, r-bioc-org.hs.eg.db, r-cran-testthat, r-bioc-biocstyle, r-cran-knitr, r-cran-runit
.
477589c
Version: 1.68.0+ds-2
.
477583,477586c
Filename: pool/main/r/r-bioc-golubesets/r-bioc-golubesets_1.48.0-2_all.deb
Size: 4528896
MD5sum: 35423932c8aa31f2ed525d9984f32eab
SHA256: 244615019f6a636e1d981ab32f4d9d599634b75c592d29f6deab2983dab6f58c
.
477577c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase (>= 2.5.5)
.
477573c
Version: 1.48.0-2
.
477567,477570c
Filename: pool/main/r/r-bioc-go.db/r-bioc-go.db_3.20.0-2_all.deb
Size: 11181416
MD5sum: dd12c7eed30bb0e36e8c49825b050d74
SHA256: 4ec9f0a740f2620e7b8d2aac4d053e765da437fecdfdcadbd60a46d4114b0ce7
.
477560c
Depends: r-api-4.0, r-bioc-annotationdbi (>= 1.67.0)
.
477556,477557c
Version: 3.20.0-2
Installed-Size: 74924
.
477550,477553c
Filename: pool/main/r/r-bioc-geoquery/r-bioc-geoquery_2.74.0+dfsg-2_all.deb
Size: 13734864
MD5sum: 46b07a98de96c2494af9c172e708b4ba
SHA256: 15b12dd795addab2611eed95c044b9c8bc3e371d154de33c4e82cd473eb665a7
.
477543c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase, r-cran-readr (>= 1.3.1), r-cran-xml2, r-cran-dplyr, r-cran-data.table, r-cran-tidyr, r-cran-magrittr, r-bioc-limma, r-cran-curl, r-cran-rentrez, r-cran-r.utils, r-cran-stringr, r-bioc-summarizedexperiment, r-bioc-s4vectors, r-cran-rvest, r-cran-httr2
.
477539,477540c
Version: 2.74.0+dfsg-2
Installed-Size: 13518
.
477537a
Package: r-bioc-genomicfeatures
Version: 1.58.0+dfsg-2
Installed-Size: 1485
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.51.2), r-bioc-s4vectors (>= 0.17.29), r-bioc-iranges (>= 2.37.1), r-bioc-genomeinfodb (>= 1.35.8), r-bioc-genomicranges (>= 1.55.2), r-bioc-annotationdbi (>= 1.41.4), r-cran-dbi, r-bioc-xvector, r-bioc-biostrings, r-bioc-rtracklayer
Suggests: r-bioc-txdbmaker, r-bioc-org.hs.eg.db, r-bioc-bsgenome, r-bioc-rsamtools, r-bioc-genomicalignments (>= 1.15.7), r-bioc-ensembldb, r-bioc-annotationfilter, r-cran-runit, r-bioc-biocstyle, r-cran-knitr, r-cran-markdown
Description: GNU R tools for making and manipulating transcript centric annotations
Homepage: https://bioconductor.org/packages/GenomicFeatures/
Description-md5: d534bd4faeaf5a9823825797ab564bb0
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-genomicfeatures/r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb
Size: 929632
MD5sum: d9ed7db21baba64b99cbac4ec6371b65
SHA256: 740cd111a94b50400ab4b13562bcc72e72f2b45e918343d8505d15394219d37e

Package: r-bioc-genomicfiles
Version: 1.42.0+dfsg-2
Installed-Size: 785
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.11.2), r-bioc-matrixgenerics, r-bioc-genomicranges (>= 1.31.16), r-bioc-summarizedexperiment, r-bioc-biocparallel (>= 1.1.0), r-bioc-rsamtools (>= 1.17.29), r-bioc-rtracklayer (>= 1.25.3), r-bioc-genomicalignments (>= 1.7.7), r-bioc-iranges, r-bioc-s4vectors (>= 0.9.25), r-bioc-variantannotation (>= 1.27.9), r-bioc-genomeinfodb
Suggests: r-bioc-biocstyle, r-cran-runit, r-bioc-genefilter, r-bioc-snpstats, r-cran-knitr, r-bioc-biostrings
Description: Distributed computing by file or by range
Homepage: https://bioconductor.org/packages/GenomicFiles/
Description-md5: e40cf90d34c73bdc5f62118033954f0e
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-genomicfiles/r-bioc-genomicfiles_1.42.0+dfsg-2_all.deb
Size: 542384
MD5sum: 6538e27fd83441d975778b45664f31ee
SHA256: be3c066e6bfbe202cf34e85a5421fc85acd1cdb80b9e9ba402ec87959b321fdd

.
477517,477520c
Filename: pool/main/r/r-bioc-genomeinfodb/r-bioc-genomeinfodb_1.42.1+dfsg-2_all.deb
Size: 3844028
MD5sum: e949c9bbd7a14e5570e743d1ca709d00
SHA256: a906468b0c85f915464082afd3c1d7d02957d264ef4fea2b9463a07c3f8b4f18
.
477510,477511c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.37.0), r-bioc-s4vectors (>= 0.25.12), r-bioc-iranges (>= 2.13.12), r-bioc-ucsc.utils, r-bioc-genomeinfodbdata
Suggests: r-cran-r.utils, r-cran-data.table, r-bioc-genomicranges, r-bioc-rsamtools, r-bioc-genomicalignments, r-bioc-genomicfeatures, r-bioc-bsgenome, r-cran-runit, r-bioc-biocstyle, r-cran-knitr
.
477506,477507c
Version: 1.42.1+dfsg-2
Installed-Size: 5034
.
477500,477503c
Filename: pool/main/r/r-bioc-geneplotter/r-bioc-geneplotter_1.84.0+dfsg-2_all.deb
Size: 1510676
MD5sum: b9b0e8e34094337e22a40757df93efd9
SHA256: d40c881c969105a2dc4d1e0b9656eb4ddbf36e8aa8b816a858bc6f97902a1918
.
477493,477494c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase, r-bioc-biocgenerics, r-cran-lattice, r-bioc-annotate, r-bioc-annotationdbi, r-cran-rcolorbrewer
Suggests: r-bioc-biocstyle, r-cran-knitr
.
477489,477490c
Version: 1.84.0+dfsg-2
Installed-Size: 1557
.
477483,477486c
Filename: pool/main/r/r-bioc-experimenthub/r-bioc-experimenthub_2.14.0+ds-2_all.deb
Size: 84508
MD5sum: 09e55c9236c0381fd7d17369f83fceed
SHA256: ed432c9f59024a04e52641148eaa2845370a118d90bea77db233add50b3908d1

Package: r-bioc-fishpond
Version: 2.12.0+ds-2
Installed-Size: 3071
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-abind, r-cran-gtools, r-bioc-qvalue, r-bioc-s4vectors, r-bioc-iranges, r-bioc-summarizedexperiment, r-bioc-genomicranges, r-cran-matrixstats, r-cran-svmisc, r-cran-matrix, r-bioc-singlecellexperiment, r-cran-jsonlite
Suggests: r-cran-testthat, r-cran-knitr, r-cran-rmarkdown, r-bioc-tximeta, r-bioc-org.hs.eg.db, r-cran-samr, r-bioc-deseq2, r-bioc-tximportdata, r-bioc-limma, r-bioc-ensembldb, r-bioc-genomicfeatures, r-bioc-annotationdbi, r-cran-pheatmap, r-bioc-gviz, r-bioc-genomeinfodb, r-cran-data.table
Description: Differential transcript and gene expression with inferential replicates
Homepage: https://bioconductor.org/packages/fishpond/
Description-md5: 7acf71e9f8155f83b7ca8e36abe5fb2a
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-fishpond/r-bioc-fishpond_2.12.0+ds-2_all.deb
Size: 1721412
MD5sum: 4fe3db667e88e77927d10c59b7f1b5bb
SHA256: 567d60480b258df8b4dfbf061616fea350130b86648eb8cb19fa8cfbcb58a4a0
.
477476,477477c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.15.10), r-bioc-annotationhub (>= 3.3.6), r-bioc-biocfilecache (>= 1.5.1), r-bioc-s4vectors, r-cran-biocmanager, r-cran-rappdirs
Suggests: r-cran-knitr, r-bioc-biocstyle, r-cran-rmarkdown, r-bioc-genomicalignments
.
477472c
Version: 2.14.0+ds-2
.
477466,477469c
Filename: pool/main/r/r-bioc-dupradar/r-bioc-dupradar_1.36.0+ds-2_all.deb
Size: 2984276
MD5sum: 99b22bc31ae72dea38f434788d4c68df
SHA256: edf4bdeddf5e20f891d360b7d5830fc32c442992bb4f5456a0f8151490573e68

Package: r-bioc-ensembldb
Version: 2.30.0+dfsg-3
Installed-Size: 2343
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.15.10), r-bioc-genomicranges (>= 1.31.18), r-bioc-genomicfeatures (>= 1.49.6), r-bioc-annotationfilter (>= 1.5.2), r-cran-rsqlite (>= 1.1), r-cran-dbi, r-bioc-biobase, r-bioc-genomeinfodb, r-bioc-annotationdbi (>= 1.31.19), r-bioc-rtracklayer, r-bioc-s4vectors (>= 0.23.10), r-bioc-rsamtools, r-bioc-iranges (>= 2.13.24), r-bioc-protgenerics, r-bioc-biostrings (>= 2.47.9), r-cran-curl
Suggests: r-bioc-biocstyle, r-cran-knitr, r-cran-testthat, r-bioc-ggbio (>= 1.24.0), r-bioc-gviz (>= 1.20.0), r-cran-rmarkdown, r-bioc-annotationhub
Description: GNU R utilities to create and use an Ensembl based annotation database
Homepage: https://bioconductor.org/packages/ensembldb/
Description-md5: 8193c0347bf158b238c1f1ab9ad7a963
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-ensembldb/r-bioc-ensembldb_2.30.0+dfsg-3_all.deb
Size: 1509952
MD5sum: 696153b613fb261bbe4ca8d0473c36de
SHA256: 31df850b3a912cfff4945d36bddf73cccf1ea6ec85b2883e181ae4495e406dbd
.
477459c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-rsubread (>= 1.14.1), r-cran-kernsmooth
.
477455c
Version: 1.36.0+ds-2
.
477449,477452c
Filename: pool/main/r/r-bioc-dir.expiry/r-bioc-dir.expiry_1.14.0+ds-2_all.deb
Size: 32276
MD5sum: 81389a831fe68d16bec4ec87750cb079
SHA256: 423df024cd401fe3660b52c416d64e4ab625ead1f21a6e1a782025fb3728bef1

Package: r-bioc-drimseq
Version: 1.34.0-2
Installed-Size: 1029
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-mass, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-limma, r-bioc-edger, r-cran-ggplot2, r-cran-reshape2
Suggests: r-bioc-biocstyle, r-cran-knitr, r-cran-testthat
Description: Differential transcript usage and tuQTL analyses with
Homepage: https://bioconductor.org/packages/DRIMSeq/
Description-md5: 5d91abefbd915b8bc752abe0d1b90130
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-drimseq/r-bioc-drimseq_1.34.0-2_all.deb
Size: 793172
MD5sum: b085f088dcc0f476a89fe4d8bf4a958b
SHA256: 3da9f3c057d958f490ce4cbe7c2a8ae5ba0cec5e12f5c480ee7b32132ac8654e
.
477442c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-filelock
.
477438,477439c
Version: 1.14.0+ds-2
Installed-Size: 74
.
477432,477435c
Filename: pool/main/r/r-bioc-delayedmatrixstats/r-bioc-delayedmatrixstats_1.28.1+ds-1_all.deb
Size: 503716
MD5sum: f7d1b6fde6815e2cfbf40e0e0679a141
SHA256: fa9741154caa880e962e4a66724180f2f4bca0a5e20c5f2ef2cf95e4f0b4327c
.
477425,477426c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-matrixgenerics (>= 1.15.1), r-bioc-delayedarray (>= 0.31.7), r-bioc-sparsematrixstats (>= 1.13.2), r-cran-matrix (>= 1.5-0), r-bioc-s4vectors (>= 0.17.5), r-bioc-iranges (>= 2.25.10), r-bioc-sparsearray (>= 1.5.19)
Suggests: r-cran-testthat, r-cran-knitr, r-cran-rmarkdown, r-bioc-biocstyle, r-cran-microbenchmark, r-cran-profmem, r-bioc-hdf5array, r-cran-matrixstats (>= 1.0.0)
.
477421,477422c
Version: 1.28.1+ds-1
Installed-Size: 742
.
477415,477418c
Filename: pool/main/r/r-bioc-decoupler/r-bioc-decoupler_2.12.0+dfsg-2_all.deb
Size: 2127780
MD5sum: 2fc85a619f041f5e3e079d369eaa4467
SHA256: a548fbdf2491762b68d4f37956bbd7176ac7255503cd4f79f03ccb0f58bbac45
.
477408,477409c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocparallel, r-cran-broom, r-cran-dplyr, r-cran-magrittr, r-cran-matrix, r-cran-parallelly, r-cran-purrr, r-cran-rlang, r-cran-stringr, r-cran-tibble, r-cran-tidyr, r-cran-tidyselect, r-cran-withr
Suggests: r-cran-glmnet (>= 4.1-7), r-bioc-gsva, r-bioc-summarizedexperiment, r-cran-rpart, r-cran-ranger, r-bioc-biocstyle, r-cran-covr, r-cran-knitr, r-cran-pkgdown, r-cran-rmarkdown, r-cran-roxygen2, r-cran-sessioninfo, r-cran-pheatmap, r-cran-testthat, r-cran-seurat, r-cran-ggplot2, r-cran-ggrepel, r-cran-patchwork, r-cran-magick
.
477404c
Version: 2.12.0+dfsg-2
.
477398,477401c
Filename: pool/main/r/r-bioc-decontam/r-bioc-decontam_1.26.0+dfsg-2_all.deb
Size: 210824
MD5sum: 40f17320b9162fa6b4b040bb784bee4d
SHA256: c1db0ccf71a19deadea5fe0e23b85a6e63b90b93bcf45f08feecb4bd58b6686a
.
477391c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-ggplot2 (>= 2.1.0), r-cran-reshape2 (>= 1.4.1)
.
477387c
Version: 1.26.0+dfsg-2
.
477381,477384c
Filename: pool/main/r/r-bioc-ctc/r-bioc-ctc_1.80.0-2_all.deb
Size: 327668
MD5sum: 5f6f77ee3ae3f81257f515f7bdcf2615
SHA256: 616eaf2b79d2d41e6c3d9c750574f0b815544d41f2e9bea84d2f8e6526db9319

Package: r-bioc-cummerbund
Version: 2.48.0-2
Installed-Size: 9306
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.3.2), r-cran-rsqlite, r-cran-ggplot2, r-cran-reshape2, r-cran-fastcluster, r-bioc-rtracklayer, r-bioc-gviz, r-cran-plyr, r-bioc-s4vectors (>= 0.9.25), r-bioc-biobase
Suggests: r-cran-cluster, r-cran-stringr, r-bioc-genomicfeatures, r-bioc-genomicranges, r-cran-rjson
Description: tool for analysis of Cufflinks RNA-Seq output
Homepage: https://bioconductor.org/packages/cummeRbund/
Description-md5: b8e141232b6d17ca7806a2bfbcdae869
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-cummerbund/r-bioc-cummerbund_2.48.0-2_all.deb
Size: 2870340
MD5sum: 786244c06b8bc32de7aa5d7c9c9198e3
SHA256: 97be70423a220356ef8e34a4a686e94d6814ac42bf46c1979e1961105c9984ed
.
477375c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-amap
.
477371,477372c
Version: 1.80.0-2
Installed-Size: 372
.
477365,477368c
Filename: pool/main/r/r-bioc-consensusclusterplus/r-bioc-consensusclusterplus_1.70.0-2_all.deb
Size: 448544
MD5sum: 16d182608dde9fd4111771533cacdb27
SHA256: 8cc192a852b8f6866eeb4e69658250b1e44b68fab07e966dda85df01bbb52503
.
477359c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase, r-bioc-all, r-cran-cluster
.
477355,477356c
Version: 1.70.0-2
Installed-Size: 512
.
477349,477352c
Filename: pool/main/r/r-bioc-complexheatmap/r-bioc-complexheatmap_2.22.0+dfsg-2_all.deb
Size: 2981472
MD5sum: b700ef2613401b423755e13d2ddb35fd
SHA256: 474e3a7aed78abd6321834573ea85ed91b619b1ca5e592c55d68a9137420ee9b
.
477342c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-circlize (>= 0.4.14), r-cran-getoptlong, r-cran-colorspace, r-cran-clue, r-cran-rcolorbrewer, r-cran-globaloptions (>= 0.1.0), r-cran-png, r-cran-digest, r-bioc-iranges, r-cran-matrixstats, r-cran-foreach, r-cran-doparallel, r-cran-codetools
.
477338c
Version: 2.22.0+dfsg-2
.
477332,477335c
Filename: pool/main/r/r-bioc-bladderbatch/r-bioc-bladderbatch_1.44.0-2_all.deb
Size: 9645796
MD5sum: b72227a2da8689af49c10c543c65c9f3
SHA256: 953520357dddf68a859e5179dfb77981b7918e5d2fb30d3aa068c7b6c02a8644

Package: r-bioc-bsgenome
Version: 1.74.0-2
Installed-Size: 7562
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.13.8), r-bioc-s4vectors (>= 0.17.28), r-bioc-iranges (>= 2.13.16), r-bioc-genomeinfodb (>= 1.25.6), r-bioc-genomicranges (>= 1.31.10), r-bioc-biostrings (>= 2.47.6), r-bioc-biocio, r-bioc-rtracklayer, r-cran-matrixstats, r-bioc-xvector, r-bioc-rsamtools
Suggests: r-cran-biocmanager, r-cran-runit
Description: BioConductor infrastructure for Biostrings-based genome data packages
Homepage: https://bioconductor.org/packages/BSgenome/
Description-md5: baaa2a828464463a7b294147f09c4799
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-bsgenome/r-bioc-bsgenome_1.74.0-2_all.deb
Size: 7011492
MD5sum: 9fa17479df8502db9095bd28ce61b536
SHA256: 9c33430910c9701305b7cdabc5284654bd9d21025efd204955aa0e0935943c12
.
477326c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase
.
477322c
Version: 1.44.0-2
.
477316,477319c
Filename: pool/main/r/r-bioc-biomart/r-bioc-biomart_2.62.0+dfsg-2_all.deb
Size: 460940
MD5sum: 7b08a375d11123edf0da581fda3848c6
SHA256: 389ed2fd7736795061de60fea640860c86d8ac538098187c54095d867e4db449

Package: r-bioc-biomformat
Version: 1.34.0+dfsg-2
Installed-Size: 413
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-plyr (>= 1.8), r-cran-jsonlite (>= 0.9.16), r-cran-matrix (>= 1.2)
Suggests: r-cran-testthat (>= 0.10), r-cran-knitr (>= 1.10), r-bioc-biocstyle (>= 1.6), r-cran-rmarkdown (>= 0.7)
Description: GNU R interface package for the BIOM file format
Homepage: https://bioconductor.org/packages/biomformat/
Description-md5: a170a6dba439df360d9b88863fe25f45
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-biomformat/r-bioc-biomformat_1.34.0+dfsg-2_all.deb
Size: 230656
MD5sum: e3ec6573a2125cc990172c2c3dfc1572
SHA256: a2a7884f4b1a67b2f93de28e5fcc7b01b563104ddd39514f01d5c27321efa750
.
477309,477310c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-annotationdbi, r-cran-progress, r-cran-stringr, r-cran-httr2, r-cran-digest, r-bioc-biocfilecache, r-cran-rappdirs, r-cran-xml2, r-cran-curl
Suggests: r-bioc-biocstyle, r-cran-knitr, r-cran-mockery, r-cran-rmarkdown, r-cran-testthat, r-cran-httptest2
.
477305,477306c
Version: 2.62.0+dfsg-2
Installed-Size: 642
.
477299,477302c
Filename: pool/main/r/r-bioc-biocviews/r-bioc-biocviews_1.74.0-2_all.deb
Size: 661576
MD5sum: b7206f9283492f2ede1f15855147043b
SHA256: 7b6d908ebeb211865bb345fc25c2c42ee9bfb4f257b024cebe1c9c533d06343d
.
477292,477293c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase, r-bioc-graph (>= 1.9.26), r-bioc-rbgl (>= 1.13.5), r-cran-xml, r-cran-rcurl, r-cran-runit, r-cran-biocmanager
Suggests: r-bioc-biocgenerics, r-cran-knitr, r-cran-commonmark, r-bioc-biocstyle
.
477288,477289c
Version: 1.74.0-2
Installed-Size: 1929
.
477282,477285c
Filename: pool/main/r/r-bioc-biocversion/r-bioc-biocversion_3.20.0-2_all.deb
Size: 11036
MD5sum: 873c4e712306708333b72c3947a5252e
SHA256: a4c83eeb607f733781a75cd274f937abb6a6289d276ed37003762dcbd4552e04
.
477276c
Depends: r-api-4.0, r-api-bioc-3.20
.
477272c
Version: 3.20.0-2
.
477266,477269c
Filename: pool/main/r/r-bioc-biocstyle/r-bioc-biocstyle_2.34.0+dfsg-1_all.deb
Size: 452448
MD5sum: 6f4e648de063436a28307c0dd732929c
SHA256: 9e632947f96c6469bc68c08f6febd554b41fe2c4a5d0f532d5b31ab8938c657b
.
477259c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-bookdown, r-cran-knitr (>= 1.30), r-cran-rmarkdown (>= 1.2), r-cran-yaml, r-cran-biocmanager, texlive-bibtex-extra, xdg-utils, r-bioc-biocversion (>= 3.19.1), r-bioc-biocgenerics (>= 0.50.0)
.
477255c
Version: 2.34.0+dfsg-1
.
477249,477252c
Filename: pool/main/r/r-bioc-biocio/r-bioc-biocio_1.16.0+dfsg-2_all.deb
Size: 209876
MD5sum: 0554dba058fc48d67e4abc3e3c917dad
SHA256: 5d78dfd094799873d7e54a5b8bd8b806dea7fa84589d0cf825accf810485b484
.
477242c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics, r-bioc-s4vectors
.
477238,477239c
Version: 1.16.0+dfsg-2
Installed-Size: 286
.
477232,477235c
Filename: pool/main/r/r-bioc-biocgenerics/r-bioc-biocgenerics_0.52.0-2_all.deb
Size: 627400
MD5sum: 8bd73b710ef7dabdb4da1be471406c27
SHA256: a9ae2410838317e39864bdf5a0636be0128deb4fc22f8b304eef2b6888a9dc34
.
477225,477226c
Suggests: r-bioc-biobase, r-bioc-s4vectors, r-bioc-iranges, r-bioc-s4arrays, r-bioc-sparsearray, r-bioc-delayedarray, r-bioc-hdf5array, r-bioc-genomicranges, r-bioc-pwalign, r-bioc-rsamtools, r-bioc-annotationdbi, r-bioc-affy, r-bioc-deseq2, r-bioc-annotate, r-cran-runit
.
477223c
Provides: r-api-bioc-3.20
.
477219,477220c
Version: 0.52.0-2
Installed-Size: 883
.
477213,477216c
Filename: pool/main/r/r-bioc-biocfilecache/r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb
Size: 301768
MD5sum: 0eb778d8311ebf8e66abcfe6bb72b370
SHA256: 410d6f90ed179e13e145378950fe0ee563ca98f1fbf00c9e696cb7afe460a56d
.
477206c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-dbplyr (>= 1.0.0), r-cran-dplyr, r-cran-rsqlite, r-cran-dbi, r-cran-filelock, r-cran-curl, r-cran-httr
.
477202,477203c
Version: 2.14.0+dfsg-2
Installed-Size: 510
.
477196,477199c
Filename: pool/main/r/r-bioc-bioccheck/r-bioc-bioccheck_1.42.1+dfsg-1_all.deb
Size: 425328
MD5sum: b5b868601b4f71f53c164162f4e65fe6
SHA256: 609ae9e98dc58383905a2cfb5ecf48de8e833b326c5efd44bea8b082c9feea20
.
477189,477190c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocbaseutils, r-bioc-biocfilecache, r-cran-biocmanager, r-bioc-biocviews, r-cran-callr, r-cran-cli, r-cran-codetools, r-bioc-graph, r-cran-httr2, r-cran-knitr, r-cran-rvest, r-cran-stringdist
Suggests: r-bioc-biocstyle, r-cran-devtools, r-cran-gert, r-cran-jsonlite, r-cran-rmarkdown, r-cran-tinytest, r-cran-usethis
.
477185,477186c
Version: 1.42.1+dfsg-1
Installed-Size: 579
.
477179,477182c
Filename: pool/main/r/r-bioc-biocbaseutils/r-bioc-biocbaseutils_1.8.0+dfsg-2_all.deb
Size: 43460
MD5sum: 48518e3494a4291184abc4cdf33b457e
SHA256: 546c2371c25dad37870e597ac1ac45629ac56626e0e7bc626038afb33f6c9b6e
.
477172c
Depends: r-api-4.0, r-api-bioc-3.20
.
477168,477169c
Version: 1.8.0+dfsg-2
Installed-Size: 95
.
477162,477165c
Filename: pool/main/r/r-bioc-basilisk.utils/r-bioc-basilisk.utils_1.18.0+ds-2_all.deb
Size: 78428
MD5sum: 0e9e8151cd83ef56c4e9cf228fc0f4fc
SHA256: ab0f70269750a344032be3e1f50fb26feebb23dd829f804695b96991518157eb
.
477155,477156c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-dir.expiry
Suggests: r-cran-reticulate, r-cran-knitr, r-cran-rmarkdown, r-bioc-biocstyle, r-cran-testthat, r-bioc-basilisk
.
477151,477152c
Version: 1.18.0+ds-2
Installed-Size: 115
.
477145,477148c
Filename: pool/main/r/r-bioc-aroma.light/r-bioc-aroma.light_3.36.0-2_all.deb
Size: 588400
MD5sum: 000cfd4333c791a4f45f443ee4c6dd34
SHA256: f1697c5ce870fb29da120177a501f653356fe852871bd754535c2823ba4c9e65

Package: r-bioc-arrayexpress
Version: 1.66.0-2
Installed-Size: 240
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase (>= 2.4.0), r-bioc-oligo, r-bioc-limma, r-cran-httr, r-cran-jsonlite, r-cran-rlang
Suggests: r-bioc-affy
Description: access to the ArrayExpress Microarray Database at EBI
Homepage: https://bioconductor.org/packages/ArrayExpress/
Description-md5: 90009b4d17ba78e35d3e6f3e29959e3b
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-arrayexpress/r-bioc-arrayexpress_1.66.0-2_all.deb
Size: 191464
MD5sum: 7e0332d13ecb3272e5a42123d1cf3ec1
SHA256: a541ae83252cb98324033700adc1f36aba6b71d4a98ad9e35651623755ab6820

Package: r-bioc-assorthead
Version: 1.0.1+ds-2
Installed-Size: 1747
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, libhnswlib-dev
Suggests: r-cran-knitr, r-cran-rmarkdown, r-bioc-biocstyle
Description: Assorted Header-Only C++ Libraries
Homepage: https://bioconductor.org/packages/assorthead/
Description-md5: 7610a5ac8e6e248b3b12e40c74e6144d
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-assorthead/r-bioc-assorthead_1.0.1+ds-2_all.deb
Size: 192724
MD5sum: 35574b914903c160cdae8af9dda709bc
SHA256: 786a2bdc836bf504f07616bb17e2ee9ba07e0f868e583b2e7a4fd2fc648222af

Package: r-bioc-ballgown
Version: 2.38.0+dfsg-2
Installed-Size: 4502
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-genomicranges (>= 1.17.25), r-bioc-iranges (>= 1.99.22), r-bioc-s4vectors (>= 0.9.39), r-cran-rcolorbrewer, r-bioc-sva, r-bioc-limma, r-bioc-rtracklayer (>= 1.29.25), r-bioc-biobase (>= 2.25.0), r-bioc-genomeinfodb
Suggests: r-cran-testthat, r-cran-knitr, r-cran-markdown
Description: Flexible, isoform-level differential expression analysis
Homepage: https://bioconductor.org/packages/ballgown/
Description-md5: f4ae5d7c8c9bcfa4c48b5e78d093a9f0
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-ballgown/r-bioc-ballgown_2.38.0+dfsg-2_all.deb
Size: 2929864
MD5sum: 0483cedccee596a214669a0c615f405b
SHA256: f952f7a609a998d4619eaee3b56497c553d2c667a4fed046ea847fc15096a4c2
.
477138c
Depends: r-api-4.0, r-api-bioc-3.20, r-cran-r.methodss3 (>= 1.7.1), r-cran-r.oo (>= 1.23.0), r-cran-r.utils (>= 2.9.0), r-cran-matrixstats (>= 0.55.0)
.
477134,477135c
Version: 3.36.0-2
Installed-Size: 920
.
477128,477131c
Filename: pool/main/r/r-bioc-annotationhub/r-bioc-annotationhub_3.14.0+dfsg-2_all.deb
Size: 446552
MD5sum: 68747f8be47b5b48afc45440c8621393
SHA256: 822d992cb0f623cb683b68dd9c22b5c76717b4c543197ac2d32c2e69568d8dfc
.
477121,477122c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.15.10), r-bioc-biocfilecache (>= 1.5.1), r-cran-rsqlite, r-cran-biocmanager, r-bioc-biocversion, r-cran-curl, r-cran-rappdirs, r-bioc-annotationdbi (>= 1.31.19), r-bioc-s4vectors, r-cran-httr, r-cran-yaml, r-cran-dplyr
Suggests: r-bioc-iranges, r-bioc-genomicranges, r-bioc-genomeinfodb, r-bioc-variantannotation, r-bioc-rsamtools, r-bioc-rtracklayer, r-bioc-biocstyle, r-cran-knitr, r-cran-runit, r-bioc-txdbmaker, r-bioc-biostrings, r-bioc-ensembldb, r-bioc-summarizedexperiment, r-bioc-experimenthub, r-cran-rmarkdown
.
477117,477118c
Version: 3.14.0+dfsg-2
Installed-Size: 726
.
477111,477114c
Filename: pool/main/r/r-bioc-annotationdbi/r-bioc-annotationdbi_1.68.0-2_all.deb
Size: 4702704
MD5sum: 869aff2b457435ebeb29ec536f9229c3
SHA256: a00a34f92bbc8aa1a9286a1a782f8554d8dff42802c3cd6136161b64f6ccb8ea

Package: r-bioc-annotationfilter
Version: 1.30.0+dfsg-2
Installed-Size: 357
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Architecture: all
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-genomicranges, r-cran-lazyeval
Suggests: r-bioc-biocstyle, r-cran-knitr, r-cran-testthat, r-cran-rsqlite, r-bioc-org.hs.eg.db, r-cran-rmarkdown
Description: facilities for filtering Bioconductor annotation resources
Homepage: https://bioconductor.org/packages/AnnotationFilter/
Description-md5: 2201de00ddabcb73053c813b56a36ab2
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-annotationfilter/r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb
Size: 246500
MD5sum: 31d12d9d2ed804194f2d5ac095812973
SHA256: 810b3df53c0ba9bab1665ebd5d2a71c51c410e9617f4bf2867fb3024ca5dc508
.
477104,477105c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.29.2), r-bioc-biobase (>= 1.17.0), r-bioc-iranges, r-cran-dbi, r-cran-rsqlite, r-bioc-s4vectors (>= 0.9.25), r-bioc-keggrest
Suggests: r-bioc-go.db, r-cran-runit, r-bioc-org.hs.eg.db, r-bioc-graph, r-bioc-biocstyle, r-cran-knitr
.
477100,477101c
Version: 1.68.0-2
Installed-Size: 8639
.
477094,477097c
Filename: pool/main/r/r-bioc-annotate/r-bioc-annotate_1.84.0+dfsg-2_all.deb
Size: 1864616
MD5sum: 4ec4af549378d7b6276a0ab5175b6d57
SHA256: f37d31f3b258716d04a2d3fb57c7e25ccf0ef42507d1eaa8be5c731b9830c140
.
477087,477088c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-annotationdbi (>= 1.27.5), r-cran-xml, r-bioc-biobase, r-cran-dbi, r-cran-xtable, r-bioc-biocgenerics (>= 0.13.8), r-cran-httr
Suggests: r-bioc-genefilter, r-bioc-biostrings (>= 2.25.10), r-bioc-iranges, r-bioc-go.db, r-bioc-org.hs.eg.db, r-cran-runit, r-bioc-biocstyle, r-cran-knitr
.
477083,477084c
Version: 1.84.0+dfsg-2
Installed-Size: 3240
.
477077,477080c
Filename: pool/main/r/r-bioc-altcdfenvs/r-bioc-altcdfenvs_2.68.0-2_all.deb
Size: 994156
MD5sum: 6a01b70ce8501042f07dcee9046bfc80
SHA256: 44b7473b4c20034617096a89a666d2e9491cd7fa7d6d473b80e45895fcc17ab2
.
477070c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biocgenerics (>= 0.1.0), r-bioc-s4vectors (>= 0.9.25), r-bioc-biobase (>= 2.15.1), r-bioc-affy, r-bioc-makecdfenv, r-bioc-biostrings, r-bioc-hypergraph
.
477066,477067c
Version: 1:2.68.0-2
Installed-Size: 1403
.
477060,477063c
Filename: pool/main/r/r-bioc-all/r-bioc-all_1.48.0-2_all.deb
Size: 11474264
MD5sum: d424a582e97bd274f18b47ea378bfff1
SHA256: 927fa5239c49216385ea6010260eb3350836e00b1bd6f3bce1f52a92e38f02b0
.
477053c
Depends: r-api-4.0, r-api-bioc-3.20, r-bioc-biobase (>= 2.5.5)
.
477049,477050c
Version: 1.48.0-2
Installed-Size: 11255
.
477043,477046c
Filename: pool/main/r/r-bioc-alabaster.schemas/r-bioc-alabaster.schemas_1.6.0+ds-2_all.deb
Size: 24432
MD5sum: 518b95e79dc060c70dbcb3733c5e5f7b
SHA256: 80cd4a117e1ee3cb5db311bd66bc6d797e39a5f4fd41d47ebb9ea16e0065d3ea
.
477040c
Description-md5: d64ed4b5840ee3ce5b8ae16a96791ca4
.
477036,477037c
Depends: r-api-4.0, r-api-bioc-3.20
Suggests: r-cran-knitr, r-cran-rmarkdown, r-bioc-biocstyle
.
477032c
Version: 1.6.0+ds-2
.
472503,472506c
Filename: pool/main/q/qcelemental/python3-qcelemental_0.29.0-1_all.deb
Size: 232904
MD5sum: 2f3f4db4e48cc299de2bbdc686d756df
SHA256: 91ae0216eb0b9e94001218723332cf3e856f7680e5e991fcd8af0c26c885ac1f
.
472497c
Depends: python3-numpy | python3-supported-max (<< 3.8) | python3-supported-min (>= 3.9), python3-packaging, python3-pydantic, python3:any
.
472493,472494c
Version: 0.29.0-1
Installed-Size: 1994
.
468805,468826d
450510,450526d
440500,440516d
422908,422925d
421221,421224c
Filename: pool/main/p/pyflakes/python3-pyflakes_3.2.0-3_all.deb
Size: 57268
MD5sum: b9bfdbb471eebe325e406f67943db664
SHA256: 8bc06a394a6b9fabdef5da26af19ae241b70a80e495628819f9542192d8a1eac
.
421214c
Depends: python3:any
.
421210c
Version: 3.2.0-3
.
421203,421206c
Filename: pool/main/p/pyflakes/pyflakes3_3.2.0-3_all.deb
Size: 10276
MD5sum: dcc7208ac95d3ec01d28a3388d65627e
SHA256: e1a93e1dc7555ff4e47c95797aff8525b7c01306772f48e74bc1a1c042a2f7f0
.
421200c
Description-md5: d5d9499d548e89a547229d7b1ea3074f
.
421196c
Depends: python3-pyflakes (= 3.2.0-3), python3:any
.
421192c
Version: 3.2.0-3
.
408681,408697d
399182,399198d
389931,389999d
389546,389584d
295051,295067d
235618,235636d
217385,217420d
193941,193960d
40854,40890d
8726,8763d